Title
Quantifying slow evolutionary dynamics in RNA fitness landscapes.
Abstract
We re-examine the evolutionary dynamics of RNA secondary structures under directional selection towards an optimum RNA structure. We find that the punctuated equilibria lead to a very slow approach to the optimum, following on average an inverse power of the evolutionary time. In addition, our study of the trajectories shows that the out-of-equilibrium effects due to the evolutionary process are very weak. In particular, the distribution of genotypes is close to that arising during equilibrium stabilizing selection. As a consequence, the evolutionary dynamics leave almost no measurable out-of-equilibrium trace, only the transition genotypes (close to the border between different periods of stasis) have atypical mutational properties.
Year
DOI
Venue
2010
10.1142/S0219720010005075
J. Bioinformatics and Computational Biology
Keywords
DocType
Volume
stabilizing selection,evolution,systems biology,rna structure,rna secondary structure,genotype,fitness landscape,phenotype,evolutionary dynamics
Journal
8
Issue
ISSN
Citations 
6
1757-6334
1
PageRank 
References 
Authors
0.35
2
3
Name
Order
Citations
PageRank
Petr Sulc182.42
Andreas Wagner210.35
Olivier C Martin319219.20