Paper Info
Title
Sarment: Python modules for HMM analysis and partitioning of sequences
Abstract
Summary: Sarment is a package of Python modules for easy building and manipulation of sequence segmentations. It provides efficient implementation of usual algorithms for hidden Markov Model computation, as well as for maximal predictive partitioning. Owing to its very large variety of criteria for computing segmentations, Sarment can handle many kinds of models. Because of object-oriented programming, the results of the segmentation are very easy tomanipulate. Availability: Sarment is available on Linux, UNIX and MacOS X operating systems. It is under GPL license. There are binaries for python2.3 or python2.4, as well as sources, in the website http://pbil.univ-lyon1.fr/software/sarment Contact: gueguen@biomserv.univ-lyon1.fr
Year
DOI
Venue
2005
10.1093/bioinformatics/bti533
Bioinformatics
Field
DocType
Volume
Data mining,Programming language,Object-oriented programming,Segmentation,Computer science,Unix,Theoretical computer science,Software,Hidden Markov model,Python (programming language),Computation
Journal
21
Issue
ISSN
Citations 
16
1367-4803
4
PageRank 
References 
Authors
0.50
6
1
Name
Order
Citations
PageRank
Laurent Gueguen1132.83