Title
Gene structure identification with MyGV using cDNA evidence and protein homologs to improve ab initio predictions.
Abstract
MyGV is an application to visualize (potentially genome-scale) gene structure annotation and prediction. The output of any external gene prediction program can be easily converted to a generalized format for input into MyGV. The application displays all input simultaneously in graphical representation, with a toggle option for a text-based view. Zooming capabilities allow detailed comparisons for specific genome locations. The tool is particularly helpful for refinement of ab initio predicted gene structures by spliced alignment with cDNA or protein homologs.
Year
DOI
Venue
2002
10.1093/bioinformatics/18.5.761
BIOINFORMATICS
Keywords
Field
DocType
gene structure
Genome,Data mining,Complementary DNA,Annotation,Gene,Computer science,Gene prediction,Zoom,Bioinformatics,Ab initio,Java
Journal
Volume
Issue
ISSN
18
5
1367-4803
Citations 
PageRank 
References 
2
0.71
3
Authors
2
Name
Order
Citations
PageRank
Wei Zhu1467.12
Volker Brendel225932.73