Paper Info
Title
Federating Heterogeneous Biological Resources on the Web: A Case Study on TRP Channel Ontology Construction.
Abstract
TRP (Transient receptor potential) channel is a biological component which could be of factors in severe diseases such as heart attack and cancer. In order for researchers to easily search for protein-protein interactions for mammalian TRP channel, TRIP Database was created. However, TRIP Database does not contain information about proteins in details, making researchers in turn visit other database services such as UniProt and PDB. In this paper, we propose a semantic TRP Ontology made from TRIP Database, allowing users to be given the collected contents from other relevant databases as well using a single request. As a practical scenario, we generate RDF triples from TRIP Database by referring to TRP Ontology designed to have links with UniProt. A federated way of collecting contents from two different services is proposed.
Year
DOI
Venue
2013
10.1007/978-3-319-06826-8_9
Lecture Notes in Computer Science
Keywords
Field
DocType
Ontology,SPARQL,TRP channel
Ontology,World Wide Web,Information retrieval,UniProt,Computer science,SPARQL,Database services,Ontology construction,RDF
Conference
Volume
ISSN
Citations 
8388
0302-9743
0
PageRank 
References 
Authors
0.34
1
6
Name
Order
Citations
PageRank
Sejin Nam12823.20
Jinhyun Ahn2255.65
Jin-Muk Lim300.68
Jae-Hong Eom4868.91
Ju-Hong Jeon541.37
Hong-Gee Kim622522.83