Title
Effects of downstream genes on synthetic genetic circuits.
Abstract
In order to understand and regulate complex genetic networks in living cells, it is important to build simple and well-defined genetic circuits. We designed such circuits using a synthetic biology approach that included mathematical modeling and simulation, with a focus on the effects by which downstream reporter genes are involved in the regulation of synthetic genetic circuits.Our results indicated that downstream genes exert two main effects on genes involved in the regulation of synthetic genetic circuits: (1) competition for regulatory proteins and (2) protein degradation in the cell.Our findings regarding the effects of downstream genes on regulatory genes and the role of impedance in driving large-scale and complex genetic circuits may facilitate the design of more accurate genetic circuits. This design will have wide applications in future studies of systems and synthetic biology.
Year
DOI
Venue
2014
10.1186/1752-0509-8-S4-S4
BMC systems biology
Keywords
Field
DocType
synthetic biology, genetic circuit, mathematical modeling, protein degradation, impedance, decoy site
Reporter gene,Gene,Biology,Systems biology,Bioinformatics,Electronic circuit,Gene regulatory network,Synthetic biology
Journal
Volume
Issue
ISSN
8 Suppl 4
S-4
1752-0509
Citations 
PageRank 
References 
1
0.36
1
Authors
3
Name
Order
Citations
PageRank
Takefumi Moriya110.36
Masayuki Yamamura224237.62
Daisuke Kiga343.10