Name
Abstract | ||
|---|---|---|
We present a new method to incrementally construct the FM-index for both short and long sequence reads, up to the size of a genome. It is the first algorithm that can build the index while implicitly sorting the sequences in the reverse (complement) lexicographical order without a separate sorting step. The implementation is among the fastest for indexing short reads and the only one that practically works for reads of averaged kilobases in length. |
Year | DOI | Venue |
|---|---|---|
2014 | 10.1093/bioinformatics/btu541 | BIOINFORMATICS |
DocType | Volume | Issue |
Journal | 30 | 22 |
ISSN | Citations | PageRank |
1367-4803 | 9 | 0.66 |
References | Authors | |
2 | 1 | |