Title
Solving stochastic chemical kinetics by Metropolis Hastings sampling.
Abstract
This study considers using Metropolis-Hastings algorithm for stochastic simulation of chemical reactions. The proposed method uses SSA (Stochastic Simulation Algorithm) distribution which is a standard method for solving well-stirred chemically reacting systems as a desired distribution. A new numerical solvers based on exponential form of exact and approximate solutions of CME (Chemical Master Equation) is employed for obtaining target and proposal distributions in Metropolis-Hastings algorithm to accelerate the accuracy of the tau-leap method. Samples generated by this technique have the same distribution as SSA and the histogram of samples show it's convergence to SSA.
Year
Venue
Keywords
2014
CoRR
cme,ssa,metropolis hastings
DocType
Volume
Citations 
Journal
abs/1410.8155
1
PageRank 
References 
Authors
0.39
4
3
Name
Order
Citations
PageRank
Azam S. Zavar Moosavi1144.12
Paul Tranquilli2254.95
Adrian Sandu320.77