Title
Volumetric constraints in 3D tomography applied to electron microscopy
Abstract
3D electron microscopy aims at the reconstruction of density volumes corresponding to the mass distribution of macromolecules imaged with an electron microscope. There are many factors limiting the resolution achievable when this technique is applied to biomolecules: microscope transfer function, molecule flexibility, lack of projections from certain directions, unknown angular distribution, image noise, etc. In this communication we propose the use of a priori information such as particle symmetry, occupied volume, known surface, density nonnegativity and similarity to a known volume in order to improve the quality of the reconstruction. When a series expansion of the reconstructed volume is done, all these constraints are expressed as a set of equations which the expansion coefficients must satisfy. In this work, this equation set is specified and the effect of each one on the reconstruction of a realistic phantom is explored.
Year
DOI
Venue
2002
10.1109/ISBI.2002.1029339
ISBI
Keywords
Field
DocType
biological techniques,biology computing,computerised tomography,electron microscopy,image reconstruction,image resolution,molecular biophysics,phantoms,proteins,series (mathematics),3D tomography,ART with blobs,a priori information,bacteriorhodopsin,biomolecules,density,density volume reconstruction,electron microscopy,equation set,expansion coefficients,image noise,known surface,lack of projections,macromolecules,mass distribution,microscope transfer function,molecule flexibility,nonnegativity,occupied volume,particle symmetry,protein,realistic phantom,reconstruction quality,resolution,series expansion,similarity,unknown angular distribution,volumetric constraints
Mathematical analysis,Imaging phantom,Series expansion,Microscope,Artificial intelligence,Iterative reconstruction,Computer vision,Surface reconstruction,Optics,Tomography,Image noise,Image resolution,Physics
Conference
ISBN
Citations 
PageRank 
0-7803-7584-X
1
0.43
References 
Authors
0
4
Name
Order
Citations
PageRank
R. Marabini1366.76
Gabor T. Herman21373582.81
Carlos O S Sorzano31008.98
José María Carazo465456.25