Title
Triplet Markov chain for 3D MRI brain segmentation using a probabilistic atlas
Abstract
In this paper, we present a new Markovian scheme for MRI segmentation using a priori knowledge obtained from prob- ability maps. Indeed we propose to use both triplet Markov chain and a brain atlas containing prior expectations about the spatial localization of the different tissue classes, to seg- ment the brain in gray matter, white matter and cerebro-spinal fluid in an unsupervised way. Experimental results on real data are included to validate this approach. Comparison with other previously used techniques demonstrates the advan- tages (robustness, low computational complexity) of this new Markovian segmentation scheme using a probabilistic atlas. Magnetic Resonance Imaging (MRI) provides three-dimen- sional description of the human brain at a high resolution which serves as a reference for clinical investigations as well as for functional studies. Quantitative analysis of anatomical structures in D images has recently become of great inter- est for the study of different pathologies (multiple sclerosis, schizophrenia). Moreover D visualization of brain struc- tures, with surface rendering methods at interactive speeds, is highly desirable for routine use in clinical settings and surgical planning. Therefore, automatic segmentation of D brain images is becoming an increasingly important process- ing step for diagnosis, treatment and surgery planning. Because of issues such as partial volume effect, noise or acquisition artifacts, segmenting cerebral structures remains a challenging task that will be hardly accomplished by meth- ods that rely only on information present in the image. For these reasons, segmentation methods, that make use of some models (a priori information) of the targeted cerebral struc- tures, were proposed (1). In (2, 3), Asbhurner and Friston proposed a modified maximum likelihood mixture model algorithm using proba- bilistic images for the segmentation. The probability images they used, are the means of binary images of white matter (WM), gray matter (GM), and cerebrospinal fluid (CSF) ob- tained from the segmentation of the original images. How- ever this method does not take into account neighborhood information, and therefore the quality of the segmentation is degraded if noise is present in the images. Other methods
Year
DOI
Venue
2006
10.1109/ISBI.2006.1624934
Arlington, VA
Keywords
Field
DocType
Markov processes,biological tissues,biomedical MRI,brain,image segmentation,medical image processing,3D MRI brain segmentation,brain tissue,cerebro-spinal fluid,gray matter,low computational complexity,probabilistic atlas,robustness,spatial localization,triplet Markov chain,white matter
Brain segmentation,Computer vision,Brain atlas,Markov process,Pattern recognition,Segmentation,Computer science,Markov chain,Robustness (computer science),Image segmentation,Artificial intelligence,Computational complexity theory
Conference
ISSN
ISBN
Citations 
1945-7928
0-7803-9576-X
11
PageRank 
References 
Authors
0.71
8
3
Name
Order
Citations
PageRank
Stephanie Bricq1513.82
Christophe Collet224635.46
Jean-paul Armspach3815.20