Title
Inference of genetic networks using linear programming machines: Application of a priori knowledge
Abstract
Recently, the inference of genetic networks was defined as a series of discrimination tasks. The inference method based on this problem definition infers genetic networks by obtaining predictors that can predict the signs of the differential coefficients of the gene expression levels. As these predictors are obtained by solving linear programming problems, the computational time of the method is very short. The method however has no explicit mechanism to utilize a priori knowledge about genetic networks. This study therefore extends the inference method based on the discrimination tasks to make it possible to utilize the a priori knowledge. In order to verify its effectiveness, we then apply the modified method to artificial genetic network inference problems.
Year
DOI
Venue
2009
10.1109/IJCNN.2009.5178679
Atlanta, GA
Keywords
Field
DocType
bioinformatics,genetics,inference mechanisms,learning (artificial intelligence),linear programming,a priori knowledge,bioinformatics,discrimination task,gene expression level,genetic network inference,linear programming,machine learning
Function approximation,Pattern recognition,Computer science,Inference,A priori and a posteriori,Design methods,Linear programming,Artificial intelligence,Knowledge engineering,Adaptive neuro fuzzy inference system,Artificial neural network,Machine learning
Conference
ISSN
ISBN
Citations 
1098-7576 E-ISBN : 978-1-4244-3553-1
978-1-4244-3553-1
6
PageRank 
References 
Authors
0.47
18
3
Name
Order
Citations
PageRank
Shuhei Kimura120415.99
Shiraishi, Y.260.47
Mariko Hatakeyama317512.17