Title
3D stochastic completion fields for fiber tractography
Abstract
We approach the problem of fiber tractography from the viewpoint that a computational theory should relate to the underlying quantity that is being measured - the diffusion of water molecules. We characterize the brownian motion of water by a 3D random walk described by a stochastic non- linear differential equation. We show that the maximum- likelihood trajectories are 3D elastica, or curves of least energy. We illustrate the model with Monte-Carlo (sequen- tial) simulations and then develop a more efficient (local, parallelizable) implementation, based on the Fokker-Planck equation. The final algorithm allows us to efficiently com- pute stochastic completion fields to connect a source region to a sink region, while taking into account the underlying diffusion MRI data. We demonstrate promising tractogra- phy results using high angular resolution diffusion data as input.
Year
DOI
Venue
2009
10.1109/CVPRW.2009.5204044
computer vision and pattern recognition
Keywords
Field
DocType
brownian motion,fokker-planck equation,monte carlo methods,biodiffusion,biomedical mri,computation theory,nonlinear differential equations,3d random walk,3d stochastic completion field,monte-carlo simulation,computational theory,diffusion mri data,fiber tractography,high angular resolution diffusion data,maximum-likelihood trajectory,sink region,source region,stochastic nonlinear differential equation,water molecule diffusion
Parallelizable manifold,Diffusion MRI,Random walk,Computer science,Artificial intelligence,Statistical physics,Fokker–Planck equation,Differential equation,Mathematical optimization,Pattern recognition,Stochastic process,Brownian motion,Tractography
Conference
Volume
Issue
ISSN
2009
1
2160-7508
ISBN
Citations 
PageRank 
978-1-4244-3994-2
2
0.39
References 
Authors
14
2
Name
Order
Citations
PageRank
Parya Momayyez150.82
Kaleem Siddiqi23259242.07