Paper Info
Title
The Genome Portal Of The Department Of Energy Joint Genome Institute
Abstract
The Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility with massive-scale DNA sequencing and analysis capabilities dedicated to advancing genomics for bioenergy and environmental applications. Beyond generating tens of trillions of DNA bases annually, the Institute develops and maintains data management systems and specialized analytical capabilities to manage and interpret complex genomic data sets, and to enable an expanding community of users around the world to analyze these data in different contexts over the web. The JGI Genome Portal (http://genome.jgi.doe.gov) provides a unified access point to all JGI genomic databases and analytical tools. A user can find all DOE JGI sequencing projects and their status, search for and download assemblies and annotations of sequenced genomes, and interactively explore those genomes and compare them with other sequenced microbes, fungi, plants or metagenomes using specialized systems tailored to each particular class of organisms. We describe here the general organization of the Genome Portal and the most recent addition, MycoCosm (http://jgi.doe.gov/fungi), a new integrated fungal genomics resource.
Year
DOI
Venue
2012
10.1093/nar/gkr947
NUCLEIC ACIDS RESEARCH
Keywords
DocType
Volume
systems integration,cluster analysis,internet,genomics
Journal
40
Issue
ISSN
Citations 
D1
0305-1048
20
PageRank 
References 
Authors
1.39
10
17
Name
Order
Citations
PageRank
Igor V. Grigoriev1201.39
Henrik Nordberg28313.61
Igor Shabalov3201.39
Andrea Aerts4201.39
Mike Cantor5201.39
David Goodstein6201.39
Alan Kuo7262.32
Simon Minovitsky81188.52
Roman Nikitin9201.39
Robin A. Ohm10251.96
Robert Otillar11251.96
A Poliakov1216923.94
Igor Ratnere13201.39
Robert Riley14536.16
Tatyana Smirnova15554.50
Daniel S Rokhsar161347.00
Dubchak Inna17393.12