Name
Title | ||
|---|---|---|
Bioinformatics visualization and integration with open standards: the Bluejay genomic browser. |
Abstract | ||
|---|---|---|
ABSTRACT: We have created a new,Java,-based integrated computational,environment,for the exploration of genomic data, called Bluejay. The system is capable of using almost any XML file related to genomic data. Non-XML data sources can be accessed via a proxy server. Bluejay has several features, which are new to Bioinformatics, including an unlimited semantic zoom capability, coupled with Scalable Vector Graphics (SVG) outputs; an implementation of the XLink standard, which features access to MAGPIE Genecards as well as any BioMOBY service accessible over the Internet; and the integration of gene chip analysis tools with the functional assignments. The system can be used as a signed web applet, Web Start, and a local stand-alone application, with or without connection to the Internet. It is available free of charge and as open source via http://bluejay.ucalgary.ca. KEYWORDS: Bioinformatics, visualization, open standards, eXtensible Markup Language (XML), Scalable Vector Graphics |
Year | Venue | Keywords |
|---|---|---|
2004 | In silico biology | extensible markup language,chip,open standard,scalable vector graphics |
Field | DocType | Volume |
Scalable Vector Graphics,World Wide Web,XML,Computer science,Java applet,Bioinformatics,XLink,GeneCards,Java,Database,Proxy server,The Internet | Journal | 5 |
Issue | ISSN | Citations |
2 | 1386-6338 | 9 |
PageRank | References | Authors |
1.13 | 14 | 7 |
Name | Order | Citations | PageRank |
|---|---|---|---|
| Andrei L Turinsky | 1 | 11 | 1.54 |
| Andrew C. Ah-seng | 2 | 39 | 2.25 |
| Paul M. K. Gordon | 3 | 9 | 1.13 |
| Julie N Stromer | 4 | 11 | 1.54 |
| Morgan L. Taschuk | 5 | 43 | 3.07 |
| Emily W. Xu | 6 | 9 | 1.47 |
| Christoph W Sensen | 7 | 36 | 3.29 |