Title
A Theoretical Examination of Diffusive Molecular Dynamics
Abstract
Diffusive molecular dynamics is a novel model for materialsincorporating atomistic resolution and reaching diffusive timescales. The main ideas of diffusive molecular dynamics are tofirst minimize an approximate variational Gaussian free energy ofthe system with respect to the mean atomic coordinates (averagingover many vibrational periods), and to then perform a diffusive stepwhere atoms and vacancies (or two species in a binary alloy) flow ona diffusive time scale via a master equation. We present amathematical framework for studying this algorithm based onrelative entropy, also known as the Kullback--Leibler divergence.This adds flexibility in how the algorithm is implemented andinterpreted. We then compare our formulation, relying on relativeentropy and absolute continuity of measures, to existingformulations and find agreement.
Year
DOI
Venue
2016
10.1137/15M1024858
SIAM Journal of Applied Mathematics
Keywords
Field
DocType
molecular dynamics,diffusive,relative entropy
Statistical physics,Absolute continuity,Flow (psychology),Atom,Gaussian,Molecular dynamics,Classical mechanics,Master equation,Kullback–Leibler divergence,Physics,Binary number
Journal
Volume
Issue
ISSN
76
6
0036-1399
Citations 
PageRank 
References 
1
0.63
6
Authors
3
Name
Order
Citations
PageRank
Gideon Simpson1288.67
Mitchell Luskin212423.89
David J. Srolovitz353.08