Title
Adjacent slice prostate cancer prediction to inform MALDI imaging biomarker analysis
Abstract
Prostate cancer is the second most common type of cancer among men in US [1]. Traditionally, prostate cancer diagnosis is made by the analysis of prostate-specific antigen (PSA) levels and histopathological images of biopsy samples under microscopes. Proteomic biomarkers can improve upon these methods. MALDI molecular spectra imaging is used to visualize protein/peptide concentrations across biopsy samples to search for biomarker candidates. Unfortunately, traditional processing methods require histopathological examination on one slice of a biopsy sample while the adjacent slice is subjected to the tissue destroying desorption and ionization processes of MALDI. The highest confidence tumor regions gained from the histopathological analysis are then mapped to the MALDI spectra data to estimate the regions for biomarker identification from the MALDI imaging. This paper describes a process to provide a significantly better estimate of the cancer tumor to be mapped onto the MALDI imaging spectra coordinates using the high confidence region to predict the true area of the tumor on the adjacent MALDI imaged slice.
Year
DOI
Venue
2010
10.1117/12.844403
Proceedings of SPIE
Keywords
Field
DocType
Prostate Cancer,Texture Analysis,MLP Classification,Histopathology
Histopathology,Biopsy,Biomarker Analysis,Biomarker (medicine),Prostate cancer,Artificial intelligence,MALDI imaging,Pathology,Computer vision,Prostate,Bioinformatics,Cancer,Physics
Conference
Volume
ISSN
Citations 
7624
0277-786X
1
PageRank 
References 
Authors
0.41
0
8
Name
Order
Citations
PageRank
Shao-Hui Chuang162.28
Xiaoyan Sun2154.26
Lisa Cazares3202.36
julius o nyalwidhe410.75
Dean Troyer531.53
John O. Semmes6555.05
jiang li7239.88
Frederic D Mckenzie87518.51