Title
Genomic distance with high indel costs.
Abstract
We determine complexity of computing the DCJ-indel distance, when DCJ and indel operations have distinct constant costs, by showing an exact formula that can be computed in linear time for any choice of (constant) costs for DCJ and indel operations. We additionally consider the problem of triangular inequality disruption and propose an algorithmically efficient correction on each member of the fam...
Year
DOI
Venue
2017
10.1109/TCBB.2016.2555301
IEEE/ACM Transactions on Computational Biology and Bioinformatics
Keywords
Field
DocType
Genomics,Biological cells,Computational modeling,Bioinformatics,Extremities,DNA,Sorting
Exact formula,Computer science,Genomics,Sorting,Triangle inequality,Bioinformatics,Time complexity,Indel
Journal
Volume
Issue
ISSN
14
3
1545-5963
Citations 
PageRank 
References 
0
0.34
0
Authors
4
Name
Order
Citations
PageRank
Hannah Poly H100.34
Raphael C. S. Machado24817.29
Simone Dantas311924.99
Marília D. V. Braga420317.00