Name
Title | ||
|---|---|---|
An investigation into inter- and intragenomic variations of graphic genomic signatures |
Abstract | ||
|---|---|---|
Our analysis confirms, for this dataset, that CGR patterns of DNA sequences from the same genome are in general quantitatively similar, while being different for DNA sequences from genomes of different species. Our assessment of the performance of the six distances analyzed uses three different quality measures and suggests that several distances outperform the Euclidean distance, which has so far been almost exclusively used for such studies. |
Year | DOI | Venue |
|---|---|---|
2015 | 10.1186/s12859-015-0655-4 | BMC Bioinformatics |
Keywords | Field | DocType |
Comparative genomics, Genomic signature, Species classification | Genome,Biology,Genomic signature,Genomics,Comparative genomics,Chaos game representation,Bioinformatics,Genetics,DNA microarray,genomic DNA | Journal |
Volume | Issue | ISSN |
16 | 1 | 1471-2105 |
Citations | PageRank | References |
6 | 0.76 | 23 |
Authors | ||
4 | ||
Name | Order | Citations | PageRank |
|---|---|---|---|
| Rallis Karamichalis | 1 | 7 | 1.45 |
| Lila Kari | 2 | 1123 | 124.45 |
| Stavros Konstantinidis | 3 | 283 | 31.10 |
| Steffen Kopecki | 4 | 68 | 9.97 |