Paper Info
Title
CoDNaS 2.0: a comprehensive database of protein conformational diversity in the native state.
Abstract
CoDNaS (conformational diversity of the native state) is a protein conformational diversity database. Conformational diversity describes structural differences between conformers that define the native state of proteins. It is a key concept to understand protein function and biological processes related to protein functions. CoDNaS offers a well curated database that is experimentally driven, thoroughly linked, and annotated. CoDNaS facilitates the extraction of key information on small structural differences based on protein movements. CoDNaS enables users to easily relate the degree of conformational diversity with physical, chemical and biological properties derived from experiments on protein structure and biological characteristics. The new version of CoDNaS includes similar to 70% of all available protein structures, and new tools have been added that run sequence searches, display structural flexibility profiles and allow users to browse the database for different structural classes. These tools facilitate the exploration of protein conformational diversity and its role in protein function.
Year
DOI
Venue
2016
10.1093/database/baw038
DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION
Field
DocType
Volume
Data mining,Protein structure database,Conformational isomerism,Computer science,Native state,Protein function,Bioinformatics,Database,Protein structure
Journal
2016
ISSN
Citations 
PageRank 
1758-0463
3
0.41
References 
Authors
9
4
Name
Order
Citations
PageRank
Alexander Miguel Monzon1214.51
Cristian O. Rohr241.16
María Silvina Fornasari3162.39
Gustavo D. Parisi4252.39