Name
Title | ||
|---|---|---|
The paralog-to-contig assignment problem: high quality gene models from fragmented assemblies. |
Abstract | ||
|---|---|---|
The ExonMatchSolver-pipeline can be employed to build highly accurate models of protein coding genes even when spanning several genomic fragments. This sets the stage for a better understanding of the evolutionary history within particular gene families which possess a large number of paralogs and in which frequent gene duplication events occurred. |
Year | DOI | Venue |
|---|---|---|
2016 | 10.1186/s13015-016-0063-y | Algorithms for Molecular Biology |
Keywords | Field | DocType |
Assignment problems,Gene models,Genome annotation,Genome assembly,Integer linear programming | Genome,Gene,Genome project,Biology,Contig,Homology (biology),Bioinformatics,Genetics,Phylogenetics,Gene family,Sequence assembly | Journal |
Volume | Issue | ISSN |
11 | 1 | 1748-7188 |
Citations | PageRank | References |
15 | 0.63 | 16 |
Authors | ||
4 | ||
Name | Order | Citations | PageRank |
|---|---|---|---|
| Henrike Indrischek | 1 | 15 | 0.63 |
| Nicolas Wieseke | 2 | 114 | 9.34 |
| Peter F. Stadler | 3 | 1839 | 152.96 |
| Sonja J. Prohaska | 4 | 145 | 11.56 |