Title
Efficient Algorithms for Sequence Analysis with Entropic Profiles.
Abstract
Entropy, being closely related to repetitiveness and compressibility, is a widely used information-related measure to assess the degree of predictability of a sequence. Entropic profiles are based on information theory principles, and can be used to study the under-/over-representation of subwords, by also providing information about the scale of conserved DNA regions. Here, we focus on the algori...
Year
DOI
Venue
2018
10.1109/TCBB.2016.2620143
IEEE/ACM Transactions on Computational Biology and Bioinformatics
Keywords
Field
DocType
Entropy,Arrays,Algorithm design and analysis,Sequences,Biological information theory,Standards
Information theory,String searching algorithm,Data structure,Suffix,Computer science,Algorithm,Theoretical computer science,Suffix array,Suffix tree,Bioinformatics,Generalized suffix tree,Compressed suffix array
Journal
Volume
Issue
ISSN
15
1
1545-5963
Citations 
PageRank 
References 
0
0.34
0
Authors
5
Name
Order
Citations
PageRank
Cinzia Pizzi113915.73
Ornamenti Mattia200.34
Spangaro Simone300.34
Simona E. Rombo419222.21
Laxmi Parida577377.21