Title
BioNetGen 2.2: advances in rule-based modeling.
Abstract
BioNetGen is an open-source software package for rule-based modeling of complex biochemical systems. Version 2.2 of the software introduces numerous new features for both model specification and simulation. Here, we report on these additions, discussing how they facilitate the construction, simulation and analysis of larger and more complex models than previously possible. Availability and Implementation: Stable BioNetGen releases (Linux, Mac OS/X and Windows), with documentation, are available at http://bionetgen.org. Source code is available at http://github.com/RuleWorld/bionetgen. Contact: bionetgen. help@gmail.com Supplementary information: Supplementary data are available at Bioinformatics online.
Year
DOI
Venue
2016
10.1093/bioinformatics/btw469
BIOINFORMATICS
Field
DocType
Volume
Rule-based modeling,Data mining,Computer science,Source code,Software,Mac OS,Documentation
Journal
32
Issue
ISSN
Citations 
21
1367-4803
13
PageRank 
References 
Authors
0.85
11
10
Name
Order
Citations
PageRank
Leonard A. Harris1955.65
Justin S. Hogg2373.01
José Juan Tapia3222.12
John A. P. Sekar4131.19
Sanjana Gupta5131.53
Ilya Korsunsky6130.85
Arshi Arora7151.45
Dipak Barua8293.16
Robert P Sheehan9131.19
James R Faeder1040931.02