Title
TCGA2BED: extracting, extending, integrating, and querying The Cancer Genome Atlas.
Abstract
The availability of the valuable TCGA data in BED format reduces the time spent in taking advantage of them: it is possible to efficiently and effectively deal with huge amounts of cancer genomic data integratively, and to search, retrieve and extend them with additional information. The BED format facilitates the investigators allowing several knowledge discovery analyses on all tumor types in TCGA with the final aim of understanding pathological mechanisms and aiding cancer treatments.
Year
DOI
Venue
2017
10.1186/s12859-016-1419-5
BMC Bioinformatics
Keywords
Field
DocType
Cancer,Data extraction,Data integration,Knowledge extraction
Data science,Data integration,Genome,Computer science,Genomics,Atlas (anatomy),Knowledge extraction,DNA sequencing,Data extraction,Bioinformatics,Cancer
Journal
Volume
Issue
ISSN
18
1
1471-2105
Citations 
PageRank 
References 
8
0.56
14
Authors
5
Name
Order
Citations
PageRank
Fabio Cumbo1154.12
Giulia Fiscon2566.59
Stefano Ceri367721657.41
Marco Masseroli440248.55
Emanuel Weitschek58410.63