Name
Title | ||
|---|---|---|
PureCN: copy number calling and SNV classification using targeted short read sequencing. |
Abstract | ||
|---|---|---|
Our algorithm provides accurate estimates of tumor purity and ploidy, even if matched normal samples are not available. This in turn allows accurate classification of SNVs. The software is provided as open source (Artistic License 2.0) R/Bioconductor package PureCN (http://bioconductor.org/packages/PureCN/). |
Year | DOI | Venue |
|---|---|---|
2016 | 10.1186/s13029-016-0060-z | Source Code for Biology and Medicine |
Keywords | Field | DocType |
Cell lines,Copy number,Heterogeneity,Hybrid capture,Loss of heterozygosity,Ploidy,Purity,Whole exome sequencing | Genotype,Ploidy,Molecular diagnostics,Biology,Germline,Somatic cell,Bioconductor,Loss of heterozygosity,Bioinformatics,Genetics,Exome sequencing | Journal |
Volume | Issue | ISSN |
11 | 1 | 1751-0473 |
Citations | PageRank | References |
0 | 0.34 | 6 |
Authors | ||
7 | ||
Name | Order | Citations | PageRank |
|---|---|---|---|
| Markus Riester | 1 | 0 | 0.34 |
| Angad P. Singh | 2 | 0 | 0.34 |
| Angela Rose Brannon | 3 | 0 | 0.34 |
| Kun Yu | 4 | 41 | 8.30 |
| Catarina D. Campbell | 5 | 0 | 0.34 |
| Derek Y. Chiang | 6 | 50 | 7.01 |
| Michael P. Morrissey | 7 | 0 | 0.34 |