Title
The HIV oligonucleotide database (HIVoligoDB).
Abstract
The human immunodeficiency virus (HIV) is associated with one of the most widespread infectious disease, the acquired immunodeficiency syndrome ( AIDS). The development of antiretroviral drugs and methods for virus detection requires a comprehensive analysis of the HIV genomic diversity, particularly in the binding sites of oligonucleotides. Here, we describe a versatile online database (HIVoligoDB) with oligonucleotides selected for the diagnosis of HIV and treatment of AIDS. Currently, the database provides an interface for visualization, analysis and download of 380 HIV-1 and 65 HIV-2 oligonucleotides annotated according to curated reference genomes. The database also allows the selection of the most conserved HIV genomic regions for the development of molecular diagnostic assays and sequence-based candidate therapeutics.
Year
DOI
Venue
2017
10.1093/database/bax005
DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION
Field
DocType
Volume
Data mining,Information retrieval,Computer science
Journal
2017
Issue
ISSN
Citations 
1
1758-0463
0
PageRank 
References 
Authors
0.34
0
3
Name
Order
Citations
PageRank
João Carneiro12612.30
Adriana Resende200.34
Filipe Pereira311.06