Abstract | ||
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In this work the temporal folding process with a cellular automaton like-scheme was modeled. The cellular automaton is implemented with an artificial neural network and evolved with Differential Evolution. This neural-CA model is applied sequentially to the amino acids of the protein chain to obtain, iteratively and through time, a final folded conformation. The Face-Centered Cubic lattice model was used for the protein conformation representation, using a relative encoding of the amino acid moves on the lattice. First results of different folded conformations with different proteins are presented and discussed. |
Year | DOI | Venue |
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2017 | 10.1145/3067695.3082543 | GECCO (Companion) |
Field | DocType | Citations |
Protein structure prediction,Cellular automaton,Combinatorics,Protein folding,Mathematical optimization,Biological system,Lattice (order),Cubic crystal system,Lattice model (finance),Energy landscape,Mathematics,Protein structure | Conference | 0 |
PageRank | References | Authors |
0.34 | 12 | 2 |
Name | Order | Citations | PageRank |
---|---|---|---|
Daniel Varela | 1 | 3 | 2.45 |
José Santos | 2 | 97 | 14.77 |