Title
Xenbase: A Genomic, Epigenomic And Transcriptomic Model Organism Database
Abstract
Xenbase (www.xenbase.org) is an online resource for researchers utilizing Xenopus laevis and Xeno-pus tropicalis, and for biomedical scientists seeking access to data generated with these model systems. Content is aggregated from a variety of external resources and also generated by in-house curation of scientific literature and bioinformatic analyses. Over the past two years many new types of content have been added along with new tools and functionalities to reflect the impact of high-throughput sequencing. These include new genomes for both supported species (each with chromosome scale assemblies), new genome annotations, genome segmentation, dynamic and interactive visualization for RNA-Seq data, updated ChIP-Seq mapping, GO terms, protein interaction data, ORFeome support, and improved connectivity to other biomedical and bioinformatic resources.
Year
DOI
Venue
2018
10.1093/nar/gkx936
NUCLEIC ACIDS RESEARCH
Field
DocType
Volume
Biology,Epigenomics,Transcriptome,Model organism,Genetics,Xenbase
Journal
46
Issue
ISSN
Citations 
D1
0305-1048
1
PageRank 
References 
Authors
0.35
19
14