Name
Abstract | ||
|---|---|---|
R platform provides some packages that are useful to process mass spectrometry imaging (MSI) data; however, none of them provide an easy to use graphical user interface (GUI). Here, we introduce rMSI, an R package for MSI data analysis focused on providing an efficient way to manage MSI data together with a GUI integrated in R environment. MS data is loaded in rMSI custom format optimized to minimize the memory footprint yet maintaining a fast spectra access. The rMSI GUI is designed for simple and effective data exploration and visualization. Moreover, rMSI is designed to be integrated in the R environment through a library of functions that can be used to share MS data across others R packages. The release of rMSI for R environment establishes a novel and flexible platform for MSI data analysis, completely free and open-source. |
Year | DOI | Venue |
|---|---|---|
2017 | 10.1093/bioinformatics/btx182 | BIOINFORMATICS |
Field | DocType | Volume |
Data mining,Computer graphics (images),Visualization,Computer science,Group method of data handling,R package | Journal | 33 |
Issue | ISSN | Citations |
15 | 1367-4803 | 0 |
PageRank | References | Authors |
0.34 | 1 | 7 |
Name | Order | Citations | PageRank |
|---|---|---|---|
| Pere Ràfols | 1 | 0 | 0.68 |
| Sonia Torres | 2 | 0 | 0.34 |
| Noelia Ramírez | 3 | 0 | 0.68 |
| Esteban del Castillo | 4 | 0 | 0.34 |
| Oscar Yanes | 5 | 0 | 1.35 |
| Jesus Brezmes | 6 | 0 | 1.01 |
| Xavier Correig | 7 | 4 | 1.60 |