Title
Fast assembling of neuron fragments in serial 3D sections.
Abstract
Reconstructing neurons from 3D image-stacks of serial sections of thick brain tissue is very time-consuming and often becomes a bottleneck in high-throughput brain mapping projects. We developed NeuronStitcher, a software suite for stitching non-overlapping neuron fragments reconstructed in serial 3D image sections. With its efficient algorithm and user-friendly interface, NeuronStitcher has been used successfully to reconstruct very large and complex human and mouse neurons.
Year
DOI
Venue
2017
10.1007/s40708-017-0063-9
Brain Informatics
Keywords
Field
DocType
Alignment,Neuron,Neuron stitcher,Reconstruct morphology,Stitch,Vaa3D
Brain mapping,Bottleneck,Image stitching,Computer science,Software suite,Bioinformatics,Neuron,Brain tissue,3d image
Journal
Volume
Issue
Citations 
4
3
2
PageRank 
References 
Authors
0.35
5
6
Name
Order
Citations
PageRank
Hanbo Chen128727.40
Daniel Maxim Iascone220.35
Nuno Maçarico da Costa320.35
ed s lein462.02
Tianming Liu51033112.95
Hanchuan Peng63930182.27