Title
Accelerating high-order mesh optimisation with an architecture-independent programming model.
Abstract
Heterogeneous manycore performance-portable programming models and libraries, such as Kokkos, have been developed to facilitate portability and maintainability of high-performance computing codes and enhance their resilience to architectural changes. Here we investigate the suitability of the Kokkos programming model for optimising the performance of the high-order mesh generator NekMesh, which has been developed to efficiently generate meshes containing millions of elements for industrial problem involving complex geometries. We describe the variational approach for a posteriori high-order mesh optimisation employed within NekMesh and its parallel implementation. We discuss its implementation for modern manycore massively parallel shared-memory CPU and GPU platforms using Kokkos and demonstrate that we achieve increased performance on multicore CPUs and accelerators compared with a native Pthreads implementation. Further, we show that we achieve additional speedup and cost reduction by running on GPUs without any hardware-specific code optimisation.
Year
DOI
Venue
2018
10.1016/j.cpc.2018.03.025
Computer Physics Communications
Keywords
Field
DocType
High-order mesh optimisation,Architecture-independent programming model,Kokkos,Portability,Parallel hardware,Variational framework
Mathematical optimization,Polygon mesh,Programming paradigm,Massively parallel,Parallel computing,POSIX Threads,Software portability,Multi-core processor,Mathematics,Maintainability,Speedup
Journal
Volume
ISSN
Citations 
229
0010-4655
1
PageRank 
References 
Authors
0.36
7
5
Name
Order
Citations
PageRank
Jan Eichstädt110.36
Mashy Green210.36
Michael Turner371.43
Joaquim Peiró4397.28
David Moxey593.02