Title
Integrating Multi-scale Gene Features for Cancer Diagnosis.
Abstract
Cancer is one of the major diseases that threaten human life. The advancement of high-throughput sequencing technology provides a way to accurately diagnose cancer and reveal the pathogenesis of cancer at the molecular level. In this study, we integrated the differentially expressed genes, and differential DNA methylation patterns, and applied multiple machine learning methods to conduct cancer diagnosis. The experimental results show that the performance of cancer diagnosis can be significantly improved with the integrated multi-scale gene features of RNA and epigenetic level. The AUC of classifier can be increased by 7.4% with multi-scale gene features compared to only differentially expressed genes, which verifies the effectiveness of the integration of multi-scale gene features for cancer diagnosis.
Year
DOI
Venue
2018
10.1007/978-3-319-97909-0_67
BIOMETRIC RECOGNITION, CCBR 2018
Keywords
Field
DocType
Cancer diagnosis,Machine learning,Gene expression,DNA methylation,High-Throughput sequencing technology
RNA,Gene,Biology,Gene expression,Pathogenesis,DNA methylation,Computational biology,Cancer,Epigenetics
Conference
Volume
ISSN
Citations 
10996
0302-9743
0
PageRank 
References 
Authors
0.34
8
6
Name
Order
Citations
PageRank
Peng Hang100.34
Mengjun Shi200.34
Quan Long300.34
Hui Li420234.25
Haifeng Zhao514.10
Meng Ma68212.29