Title
Functional programming for modular Bayesian inference
Abstract
We present an architectural design of a library for Bayesian modelling and inference in modern functional programming languages. The novel aspect of our approach are modular implementations of existing state-of-the-art inference algorithms. Our design relies on three inherently functional features: higher-order functions, inductive data-types, and support for either type-classes or an expressive module system. We provide a performant Haskell implementation of this architecture, demonstrating that high-level and modular probabilistic programming can be added as a library in sufficiently expressive languages. We review the core abstractions in this architecture: inference representations, inference transformations, and inference representation transformers. We then implement concrete instances of these abstractions, counterparts to particle filters and Metropolis-Hastings samplers, which form the basic building blocks of our library. By composing these building blocks we obtain state-of-the-art inference algorithms: Resample-Move Sequential Monte Carlo, Particle Marginal Metropolis-Hastings, and Sequential Monte Carlo Squared. We evaluate our implementation against existing probabilistic programming systems and find it is already competitively performant, although we conjecture that existing functional programming optimisation techniques could reduce the overhead associated with the abstractions we use. We show that our modular design enables deterministic testing of inherently stochastic Monte Carlo algorithms. Finally, we demonstrate using OCaml that an expressive module system can also implement our design.
Year
DOI
Venue
2018
10.1145/3236778
Proceedings of the ACM on Programming Languages
Keywords
Field
DocType
Anglican,Bayesian inference,Markov Chain Monte Carlo,Monte Carlo samplers,Sequential Monte Carlo,WebPPL,functional programming,higher-order functions,inductive types,machine learning,module systems,monad transformers,monads,probabilistic programming,type-classes
Programming language,Bayesian inference,Markov chain Monte Carlo,Functional programming,Inference,Computer science,Particle filter,Theoretical computer science,Haskell,Probabilistic logic,Modular design
Journal
Volume
Issue
ISSN
2
ICFP
2475-1421
Citations 
PageRank 
References 
1
0.36
16
Authors
3
Name
Order
Citations
PageRank
Adam Scibior1262.62
Ohad Kammar250.84
Zoubin Ghahramani3104551264.39