Abstract | ||
---|---|---|
Scaffolding an assembly that has been corrected with Tigmint yields a final assembly that is both more correct and substantially more contiguous than an assembly that has not been corrected. Using single-molecule sequencing in combination with linked reads enables a genome sequence assembly that achieves both a high sequence contiguity as well as high scaffold contiguity, a feat not currently achievable with either technology alone. |
Year | DOI | Venue |
---|---|---|
2018 | 10.1186/s12859-018-2425-6 | BMC Bioinformatics |
Keywords | Field | DocType |
10x Genomics Chromium,Assembly correction,Genome scaffolding,Genome sequence assembly,Linked reads | Genome,Biology,Source code,Genomics,DNA sequencing,Human genome,Computational biology,Genetics,Sequence assembly | Journal |
Volume | Issue | ISSN |
19 | 1 | 1471-2105 |
Citations | PageRank | References |
0 | 0.34 | 8 |
Authors | ||
11 |
Name | Order | Citations | PageRank |
---|---|---|---|
Shaun D Jackman | 1 | 72 | 7.37 |
Lauren Coombe | 2 | 3 | 1.80 |
Justin Chu | 3 | 11 | 4.70 |
René L. Warren | 4 | 95 | 25.03 |
Benjamin Vandervalk | 5 | 121 | 9.60 |
Sarah Yeo | 6 | 3 | 1.12 |
Zhuyi Xue | 7 | 0 | 0.34 |
Hamid Mohamadi | 8 | 66 | 5.37 |
Jörg Bohlmann | 9 | 10 | 1.04 |
Steven J. M. Jones | 10 | 578 | 71.55 |
Inanç Birol | 11 | 4 | 3.83 |