Title
Tigmint: correcting assembly errors using linked reads from large molecules.
Abstract
Scaffolding an assembly that has been corrected with Tigmint yields a final assembly that is both more correct and substantially more contiguous than an assembly that has not been corrected. Using single-molecule sequencing in combination with linked reads enables a genome sequence assembly that achieves both a high sequence contiguity as well as high scaffold contiguity, a feat not currently achievable with either technology alone.
Year
DOI
Venue
2018
10.1186/s12859-018-2425-6
BMC Bioinformatics
Keywords
Field
DocType
10x Genomics Chromium,Assembly correction,Genome scaffolding,Genome sequence assembly,Linked reads
Genome,Biology,Source code,Genomics,DNA sequencing,Human genome,Computational biology,Genetics,Sequence assembly
Journal
Volume
Issue
ISSN
19
1
1471-2105
Citations 
PageRank 
References 
0
0.34
8
Authors
11
Name
Order
Citations
PageRank
Shaun D Jackman1727.37
Lauren Coombe231.80
Justin Chu3114.70
René L. Warren49525.03
Benjamin Vandervalk51219.60
Sarah Yeo631.12
Zhuyi Xue700.34
Hamid Mohamadi8665.37
Jörg Bohlmann9101.04
Steven J. M. Jones1057871.55
Inanç Birol1143.83