Name
Title | ||
|---|---|---|
iSwathX: an interactive web-based application for extension of DIA peptide reference libraries. |
Abstract | ||
|---|---|---|
Large-scale peptide mass spectrometry (MS)/MS reference libraries are essential for the comprehensive analysis of data-independent acquisition (DIA) MS datasets, providing a comprehensive set of spectra for identification and quantification of proteins. We have developed a novel web-based R-package (iSwathX) for combining reference libraries that is compatible with different DIA analysis software. This open-source web GUI automates the process of normalization and combination of spectral libraries and provides a user-friendly method for performing library format conversions, analysis and visualizations, with no need for programing familiarity. |
Year | DOI | Venue |
|---|---|---|
2019 | 10.1093/bioinformatics/bty660 | BIOINFORMATICS |
Field | DocType | Volume |
Data mining,World Wide Web,Computer science,Web application | Journal | 35 |
Issue | ISSN | Citations |
3 | 1367-4803 | 0 |
PageRank | References | Authors |
0.34 | 0 | 7 |
Name | Order | Citations | PageRank |
|---|---|---|---|
| Zainab Noor | 1 | 0 | 0.68 |
| Jemma X. Wu | 2 | 0 | 0.68 |
| Dana Pascovici | 3 | 1 | 0.76 |
| Abidali Mohamedali | 4 | 0 | 0.68 |
| Mark P Molloy | 5 | 0 | 0.34 |
| Mark S Baker | 6 | 0 | 0.68 |
| Shoba Ranganathan | 7 | 689 | 36.60 |