Title
A Novel MKL Method for GBM Prognosis Prediction by Integrating Histopathological Image and Multi-omics Data.
Abstract
Glioblastoma multiforme (GBM) is one of the most malignant brain tumors with very short prognosis expectation. To improve patients’ clinical treatment and their life quality after surgery, researches have developed tremendous <italic xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">in silico</italic> models and tools for predicting GBM prognosis based on molecular datasets and have earned great success. However, pathology still plays the most critical role in cancer diagnosis and prognosis in the clinic at present. Recent advancement of storing and processing histopathological images has drawn attention of researchers. Models based on histopathological images are developed, which show great potential for computer-aided pathological diagnoses. But models based on both molecular and histopathological images that could predict GBM prognosis with high accuracy are not present yet. In our previous research, we used the simple MKL method to integrate multi-omics data to improve GBM prognosis prediction successfully. In this paper, we have developed a novel multiple kernel learning (MKL) method, named histopathological integrating multiple kernel learning (HI-MKL), that could integrate both histopathological images and multi-omics data efficiently. By using datasets from The Cancer Genome Atlas project, we have built a system that could predict the GBM prognosis with high accuracy. Our research shows that HI-MKL is an accurate, robust, and generalized MKL method, which performs well in a GBM prognosis task.
Year
DOI
Venue
2020
10.1109/JBHI.2019.2898471
IEEE journal of biomedical and health informatics
Keywords
Field
DocType
Prognostics and health management,Feature extraction,Cancer,Shape measurement,Size measurement,Area measurement,Kernel
Pattern recognition,Glioblastoma,Clinical treatment,Computer science,Omics,Artificial intelligence,Computational biology,Life quality,Cancer,Medical diagnosis
Journal
Volume
Issue
ISSN
24
1
2168-2194
Citations 
PageRank 
References 
1
0.35
0
Authors
4
Name
Order
Citations
PageRank
Ya Zhang191.27
Ao Li2607.89
Jie He32911.10
Minghui Wang4548.18