Name
Title | ||
|---|---|---|
Analysis of Genomic Tiling Microarrays for Transcript Mapping and the Identification of Transcription Factor Binding Sites |
Abstract | ||
|---|---|---|
The recently developed technology of genomic tiling microarrays, which can be used for genome annotation, has required the
development of new methodologies [Royce et.al] for their design and analysis. Genomic tiling arrays use PCR amplicons or short
oligonucleotide probes to tile the non-repetitive DNA sequence of a genome in an unbiased fashion for the purposes of detecting novel genomic features.
Specifically, they can be used for the identification of novel transcripts, distinguishing between different splice isoforms
and for finding transcription factor binding sites using Chromatin-Immunoprecipitation on chip experiments (ChIP-chip).
|
Year | DOI | Venue |
|---|---|---|
2005 | 10.1007/11532323_4 | BSB |
Keywords | Field | DocType |
transcription factor binding site,genome annotation,repetitive dna,chromatin immunoprecipitation,chip,oligonucleotide probe | Genome,DNA binding site,Tiling array,Biology,Genome project,ChIP-sequencing,Amplicon,DNA sequencing,Bioinformatics,Genetics,DNA microarray | Conference |
Volume | ISSN | ISBN |
3594 | 0302-9743 | 3-540-28008-1 |
Citations | PageRank | References |
0 | 0.34 | 0 |
Authors | ||
6 | ||
Name | Order | Citations | PageRank |
|---|---|---|---|
| Joel S. Rozowsky | 1 | 12 | 2.54 |
| Paul Bertone | 2 | 48 | 6.13 |
| Thomas E. Royce | 3 | 51 | 5.23 |
| Sherman Weissman | 4 | 0 | 0.34 |
| Michael Snyder | 5 | 138 | 26.15 |
| Mark Gerstein | 6 | 354 | 45.41 |