Title | ||
---|---|---|
Updated and standardized genome-scale reconstruction of <Emphasis Type="Italic">Mycobacterium tuberculosis</Emphasis> H37Rv, iEK1011, simulates flux states indicative of physiological conditions |
Abstract | ||
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The efficacy of antibiotics against M. tuberculosis has been shown to be influenced by experimental media conditions. Investigations of M. tuberculosis growth in physiological conditions have described an environment that is different from common in vitro media. Thus, elucidating the interplay between available nutrient sources and antibiotic efficacy has clear medical relevance. While genome-scale reconstructions of M. tuberculosis have enabled the ability to interrogate media differences for the past 10 years, recent reconstructions have diverged from each other without standardization. A unified reconstruction of M. tuberculosis H37Rv would elucidate the impact of different nutrient conditions on antibiotic efficacy and provide new insights for therapeutic intervention. |
Year | DOI | Venue |
---|---|---|
2018 | 10.1186/s12918-018-0557-y | BMC Systems Biology |
Keywords | Field | DocType |
M. tuberculosis, Genome-scale reconstruction, Environmental condition, Antibiotic resistance | Antibiotic resistance,Genome,Mycobacterium tuberculosis,Biology,Antibiotics,Systems biology,Genomics,Computational biology,Bioinformatics,Mycobacterium tuberculosis H37Rv,Tuberculosis | Journal |
Volume | Issue | ISSN |
12 | 1 | 1752-0509 |
Citations | PageRank | References |
0 | 0.34 | 9 |
Authors | ||
9 |
Name | Order | Citations | PageRank |
---|---|---|---|
Erol S. Kavvas | 1 | 2 | 1.46 |
Yara Seif | 2 | 0 | 1.35 |
James T. Yurkovich | 3 | 0 | 0.34 |
Charles Norsigian | 4 | 0 | 0.34 |
Saugat Poudel | 5 | 0 | 0.34 |
William W. Greenwald | 6 | 0 | 0.34 |
Sankha Ghatak | 7 | 0 | 0.34 |
Bernhard O. Palsson | 8 | 751 | 67.99 |
Jonathan Monk | 9 | 0 | 3.04 |