Title
iSeg: an efficient algorithm for segmentation of genomic and epigenomic data.
Abstract
We have developed an efficient general-purpose segmentation tool and showed that it had comparable or more accurate results than many of the most popular segment-calling algorithms used in contemporary genomic data analysis. iSeg is capable of analyzing datasets that have both positive and negative values. Tunable parameters allow users to readily adjust the statistical stringency to best match the biological nature of individual datasets, including widely or sparsely mapped genomic datasets or those with non-normal distributions.
Year
DOI
Venue
2018
10.1186/s12859-018-2140-3
BMC Bioinformatics
Field
DocType
Volume
Genome,Data mining,Biology,Genomics,Dynamic programming,Data structure,Epigenomics,Segmentation,Binary tree,Algorithm,Statistical model,Bioinformatics,Genetics
Journal
19
Issue
ISSN
Citations 
1
1471-2105
1
PageRank 
References 
Authors
0.35
18
7
Name
Order
Citations
PageRank
Senthil B. Girimurugan110.69
Yuhang Liu221.17
Pei-Yau Lung310.35
Daniel L. Vera411.03
Jonathan Dennis5123.51
Hank W. Bass6121.01
Jinfeng Zhang78610.11