Name
Title | ||
|---|---|---|
ICoVeR - an interactive visualization tool for verification and refinement of metagenomic bins. |
Abstract | ||
|---|---|---|
ICoVeR is an open source software package that allows curation of disparate genome bins generated with automatic binning algorithms. It is freely available under the GPLv3 license at https://git.list.lu/eScience/ICoVeR . The data management and analytical functions of ICoVeR are implemented in R, therefore the software can be easily installed on any system for which R is available. Installation and usage guide together with the example files ready to be visualized are also provided via the project wiki. ICoVeR running instance preloaded with AD microbiome and Sharon's datasets can be accessed via the website. |
Year | DOI | Venue |
|---|---|---|
2017 | 10.1186/s12859-017-1653-5 | BMC Bioinformatics |
Keywords | Field | DocType |
Contig bin visualization,Genome reconstruction,Metagenomics,Software | Genome,Data mining,Dimensionality reduction,Computer science,Visualization,Metagenomics,Parallel coordinates,Interactive visualization,Software,Bioinformatics,Data management | Journal |
Volume | Issue | ISSN |
18 | 1 | 1471-2105 |
Citations | PageRank | References |
1 | 0.34 | 7 |
Authors | ||
9 | ||
Name | Order | Citations | PageRank |
|---|---|---|---|
| Bertjan Broeksema | 1 | 49 | 4.79 |
| Magdalena Calusinska | 2 | 1 | 0.68 |
| Fintan McGee | 3 | 40 | 5.21 |
| Klaas Winter | 4 | 1 | 0.34 |
| Francesco Bongiovanni | 5 | 1 | 0.34 |
| Xavier Goux | 6 | 1 | 0.34 |
| Paul Wilmes | 7 | 5 | 1.83 |
| philippe delfosse | 8 | 4 | 1.34 |
| Mohammad Ghoniem | 9 | 394 | 30.77 |