Title
Crowding Differential Evolution for Protein Structure Prediction.
Abstract
A hybrid combination between differential evolution and a local refinement of protein structures provided by fragment replacements was performed for protein structure prediction. The coarse-grained protein conformation representation of the Rosetta environment was used. Given the deceptiveness of the Rosetta energy model, an evolutionary computing niching method, crowding, was incorporated in the evolutionary algorithm with the aim to obtain optimized solutions that at the same time provide a set of diverse protein folds. Thus, the probability to obtain optimized conformations close to the native structure is increased.
Year
DOI
Venue
2019
10.1007/978-3-030-19651-6_19
Lecture Notes in Computer Science
Field
DocType
Volume
Protein structure prediction,Evolutionary algorithm,Computer science,Crowding,Algorithm,Evolutionary computation,Differential evolution,Artificial intelligence,Machine learning,Protein structure
Conference
11487
ISSN
Citations 
PageRank 
0302-9743
0
0.34
References 
Authors
0
2
Name
Order
Citations
PageRank
Daniel Varela132.45
José Santos29714.77