Title
: A tumor growth code based on reaction-diffusion equations using shared memory.
Abstract
In recent years, in-silico experimentation within the field of oncological medicine has been intensively investigated with the aim of better understanding tumor dynamics and dose–response relationships in cancer treatments. In a series of previous works, Luján et al. (2018, 2017, 2016)we described the micro-environmental influence on micro-tumor infiltration patterns through in-silico/in-vitro experimentation. Here we present the latest version of the software utilized for, but not limited to, those studies: LibreGrowth, a libre tumor growth code able to simulate the core growth and peripheral tumor cell infiltration, considering a benign and a malignant stages. We implemented a reaction–diffusion based model, with spatially variable diffusion coefficient, into a three-dimensional domain, using C++ and OpenMP over a GNU/Linux system. LibreGrowth aims to provide a flexible implementation for depicting heterogeneous tissues and infiltration processes, and to shed light in current therapy optimization strategies.
Year
DOI
Venue
2019
10.1016/j.cpc.2019.05.005
Computer Physics Communications
Keywords
DocType
Volume
Tumor growth models,Reaction–diffusion equations,Shared memory parallelization
Journal
243
ISSN
Citations 
PageRank 
0010-4655
0
0.34
References 
Authors
0
4
Name
Order
Citations
PageRank
Emmanuel Luján110.69
M. S. Rosito200.34
Alejandro Soba354.59
Cecilia Suárez400.68