Title
Diversifying chemical libraries with generative topographic mapping.
Abstract
Generative topographic mapping was used to investigate the possibility to diversify the in-house compounds collection of Boehringer Ingelheim (BI). For this purpose, a 2D map covering the relevant chemical space was trained, and the BI compound library was compared to the Aldrich-Market Select (AMS) database of more than 8M purchasable compounds. In order to discover new (sub)structures, the “AutoZoom” tool was developed and applied in order to analyze chemotypes of molecules residing in heavily populated zones of a map and to extract the corresponding maximum common substructures. A set of 401K new structures from the AMS database was retrieved and checked for drug-likeness and biological activity.
Year
DOI
Venue
2020
10.1007/s10822-019-00215-x
Journal of Computer-Aided Molecular Design
Keywords
DocType
Volume
Generative topographic mapping, Chemical library diversity enrichment, Big data
Journal
34
Issue
ISSN
Citations 
7
0920-654X
0
PageRank 
References 
Authors
0.34
0
5
Name
Order
Citations
PageRank
Arkadii Lin100.68
Bernd Beck2101.98
Dragos Horvath320923.13
Gilles Marcou418115.81
Alexandre Varnek535439.51