Name
Abstract | ||
|---|---|---|
The PathoSystems Resource Integration Center (PATRIC) is the bacterial Bioinformatics Resource Center funded by the National Institute of Allergy and Infectious Diseases (https://www.patricbrc.org). PATRIC supports bioinformatic analyses of all bacteria with a special emphasis on pathogens, offering a rich comparative analysis environment that provides users with access to over 250 000 uniformly annotated and publicly available genomes with curated metadata. PATRIC offers web-based visualization and comparative analysis tools, a private workspace in which users can analyze their own data in the context of the public collections, services that streamline complex bioinformatic workflows and command-line tools for bulk data analysis. Over the past several years, as genomic and other omics-related experiments have become more cost-effective and widespread, we have observed considerable growth in the usage of and demand for easy-to-use, publicly available bioinformatic tools and services. Here we report the recent updates to the PATRIC resource, including new web-based comparative analysis tools, eight new services and the release of a command-line interface to access, query and analyze data. |
Year | DOI | Venue |
|---|---|---|
2020 | 10.1093/nar/gkz943 | NUCLEIC ACIDS RESEARCH |
DocType | Volume | Issue |
Journal | 48 | D1 |
ISSN | Citations | PageRank |
0305-1048 | 1 | 0.39 |
References | Authors | |
0 | 34 | |
Name | Order | Citations | PageRank |
|---|---|---|---|
| James J Davis | 1 | 54 | 3.83 |
| Alice R Wattam | 2 | 110 | 8.20 |
| Ramy K. Aziz | 3 | 68 | 5.22 |
| Thomas Brettin | 4 | 1 | 0.39 |
| Ralph Butler | 5 | 8 | 1.75 |
| Rory M Butler | 6 | 1 | 0.39 |
| Philippe Chlenski | 7 | 1 | 0.72 |
| Neal Conrad | 8 | 1 | 0.39 |
| Allan Dickerman | 9 | 1 | 0.39 |
| Emily M Dietrich | 10 | 1 | 0.39 |
| Joseph L. Gabbard | 11 | 530 | 50.58 |
| Svetlana Gerdes | 12 | 70 | 6.19 |
| Andrew Guard | 13 | 1 | 0.39 |
| Ronald W Kenyon | 14 | 4 | 1.23 |
| Dustin Machi | 15 | 61 | 5.88 |
| chunhong mao | 16 | 157 | 10.55 |
| Dan Murphy-Olson | 17 | 1 | 0.39 |
| Marcus Nguyen | 18 | 1 | 1.06 |
| Eric K. Nordberg | 19 | 103 | 8.24 |
| Gary J. Olsen | 20 | 301 | 95.93 |
| Robert D Olson | 21 | 1 | 0.39 |
| Jamie C Overbeek | 22 | 1 | 0.39 |
| Ross Overbeek | 23 | 1 | 0.39 |
| Bruce Parrello | 24 | 1 | 0.39 |
| Gordon D Pusch | 25 | 217 | 32.32 |
| Maulik Shukla | 26 | 1 | 0.39 |
| Chris Thomas | 27 | 1 | 0.39 |
| Margo VanOeffelen | 28 | 1 | 0.72 |
| Veronika Vonstein | 29 | 145 | 10.65 |
| Andrew S Warren | 30 | 1 | 0.39 |
| Fangfang Xia | 31 | 1 | 0.39 |
| Dawen Xie | 32 | 1 | 0.72 |
| Hyunseung Yoo | 33 | 4 | 1.91 |
| Rick L. Stevens | 34 | 1327 | 135.40 |