Paper Info
Title
Galaxy HiCExplorer 3: a web server for reproducible Hi-C, capture Hi-C and single-cell Hi-C data analysis, quality control and visualization.
Abstract
The Galaxy HiCExplorer provides a web service at https://hicexplorer.usegalaxy.eu. It enables the integrative analysis of chromosome conformation by providing tools and computational resources to pre-process, analyse and visualize Hi-C, Capture Hi-C (cHi-C) and single-cell Hi-C (scHi-C) data. Since the last publication, Galaxy HiCExplorer has been expanded considerably with new tools to facilitate the analysis of cHi-C and to provide an in-depth analysis of Hi-C data. Moreover, it supports the analysis of scHi-C data by offering a broad range of tools. With the help of the standard graphical user interface of Galaxy, presented workflows, extensive documentation and tutorials, novices as well as Hi-C experts are supported in their Hi-C data analysis with Galaxy HiCExplorer.
Year
DOI
Venue
2020
10.1093/nar/gkaa220
NUCLEIC ACIDS RESEARCH
DocType
Volume
Issue
Journal
48
W1
ISSN
Citations 
PageRank 
0305-1048
0
0.34
References 
Authors
0
7
Name
Order
Citations
PageRank
Joachim Wolff101.01
Leily Rabbani210.70
Ralf Gilsbach300.68
Gautier Richard400.34
Thomas Manke5917.53
Rolf Backofen61213104.30
Björn A Grüning700.68