Title
Finding the root graph through minimum edge deletion
Abstract
•The problem of finding allelable graphs for haplotype phasing can be solved via mathematical programming.•Based on graph colouring, several formulations are studied and valid inequalities are devised.•When applied to a real dataset, the proposed formulations significantly improve the running times with respect to the existing models.•New synthetically generated datasets are proposed for the problem.
Year
DOI
Venue
2021
10.1016/j.ejor.2020.07.001
European Journal of Operational Research
Keywords
DocType
Volume
Line graphs,Discrete optimization,Haplotyping
Journal
289
Issue
ISSN
Citations 
1
0377-2217
0
PageRank 
References 
Authors
0.34
0
3
Name
Order
Citations
PageRank
martine labbe11238108.61
Alfredo Marín245332.98
Mercedes Pelegrin301.69