Title
Prediction of PBMC Cell Types Using scRNAseq Reference Profiles.
Abstract
Single cell transcriptomics enables a high-resolution concurrent measurement of gene expression from tens of thousands of cells. We developed a method for determining standardized profiles from SCT data. We defined 48 data sets from 13 different studies and developed single-cellderived-class” (SCDC) profiles representing multiple classes and subclasses of peripheral blood mononuclear cells (PBMC). We applied pattern recognition analysis by calculating the distance from each query cell to the SCDC profiles (excluding the profiles of the query cells). Classification of cells by pattern recognition showed excellent performance for PBMC that were isolated, but not further processed by cell sorting.
Year
DOI
Venue
2020
10.1109/BIBM49941.2020.9313410
BIBM
DocType
Citations 
PageRank 
Conference
0
0.34
References 
Authors
0
7
Name
Order
Citations
PageRank
Luning Yang101.69
Yihan Zhang21714.15
Nenad Mitic301.69
Derin B. Keskin402.37
G.L. Zhang520816.91
Lou Chitkushev6319.07
Vladimir Brusic755163.37