Title
GapPredict – A Language Model for Resolving Gaps in Draft Genome Assemblies
Abstract
Short-read DNA sequencing instruments can yield over 1012 bases per run, typically composed of reads 150 bases long. Despite this high throughput, de novo assembly algorithms have difficulty reconstructing contiguous genome sequences using short reads due to both repetitive and difficult-to-sequence regions in these genomes. Some of the short read assembly challenges ar...
Year
DOI
Venue
2021
10.1109/TCBB.2021.3109557
IEEE/ACM Transactions on Computational Biology and Bioinformatics
Keywords
DocType
Volume
Genomics,Bioinformatics,Predictive models,Training data,Deep learning,Neural networks,Sequential analysis
Journal
18
Issue
ISSN
Citations 
6
1545-5963
0
PageRank 
References 
Authors
0.34
0
5
Name
Order
Citations
PageRank
Eric Chen100.34
Justin Chu2114.70
Jessica Zhang300.34
René L. Warren49525.03
Inanç Birol543.83