Title
CORONARY ARTERY LUMEN SEGMENTATION IN CCTA USING 3D CNN WITH PARTIAL ANNOTATIONS
Abstract
Accurate three-dimensional (3D) segmentation of the coronary artery lumen is an essential step in the quantitative analysis of coronary artery stenosis. However, due to the small size and complex structure of the coronary artery tree, it is difficult and laborious to perform voxel-by-voxel labeling of the lumen on 3D cardiac computed tomography angiography (CCTA) images. Since radiologists tend to focus only on the regions of interest, the annotations collected are often imperfect and contain some false-negative targets. To address the problem of partial annotations, a 3D convolutional neural network (CNN)-based approach for coronary artery lumen segmentation is proposed. Our CNN model adopts an U-Net like backbone and has multiple auxiliary branches on the expanding path. In the inference stage, an uncertain map of the network prediction is generated from the multiple abstract feature maps, which is used to refine the segmentation results. Experimental results on the MICCAI 2020 Automated Segmentation of Coronary Arteries (ASOCA) challenge dataset show that our method achieves even better segmentation accuracy with partial annotations than the backbone model trained with full annotations.
Year
DOI
Venue
2021
10.1109/ISBI48211.2021.9434025
2021 IEEE 18TH INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING (ISBI)
Keywords
DocType
ISSN
Coronary artery lumen, semantic segmentation, partial annotations, 3D CNN, uncertainty estimation
Conference
1945-7928
Citations 
PageRank 
References 
0
0.34
0
Authors
6
Name
Order
Citations
PageRank
Fei Chen100.34
Chen Wei200.34
Shenghan Ren300.34
Zhen Zhou400.34
Lei Xu500.34
Jimin Liang600.34