Title
Computational modeling of protein conformational changes - Application to the opening SARS-CoV-2 spike
Abstract
•Introduce a new hybrid framework for the simulation of proteins' electro-geometric properties.•Combine Markov states models simulation with continuum modeling to obtain dynamical electric potential maps.•Construct new a posteriori error estimates for biomolecular computations.•Reveal and characterize variations of the electro-geometric properties of the SARS-CoV-2 spike protein as it opens.
Year
DOI
Venue
2021
10.1016/j.jcp.2021.110591
Journal of Computational Physics
Keywords
DocType
Volume
SARS-CoV-2,Covid-19,Spike protein,Molecular trajectory,Poisson-Boltzmann,Multiscale modeling
Journal
444
ISSN
Citations 
PageRank 
0021-9991
0
0.34
References 
Authors
0
4
Name
Order
Citations
PageRank
Anna Kucherova100.34
Selma Strango200.34
Shahar Sukenik300.34
Maxime Theillard401.01