Abstract | ||
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A Summary: COBREXA.jl is a Julia package for scalable, high-performance constraint-based reconstruction and analysis of very large-scale biological models. Its primary purpose is to facilitate the integration of modern high performance computing environments with the processing and analysis of large-scale metabolic models of challenging complexity. We report the architecture of the package, and demonstrate how the design promotes analysis scalability on several use-cases with multi-organism community models. |
Year | DOI | Venue |
---|---|---|
2022 | 10.1093/bioinformatics/btab782 | BIOINFORMATICS |
DocType | Volume | Issue |
Journal | 38 | 4 |
ISSN | Citations | PageRank |
1367-4803 | 0 | 0.34 |
References | Authors | |
0 | 12 |
Name | Order | Citations | PageRank |
---|---|---|---|
Miroslav Kratochvíl | 1 | 0 | 0.34 |
Laurent Heirendt | 2 | 0 | 0.34 |
St Elmo Wilken | 3 | 0 | 0.34 |
Taneli Pusa | 4 | 0 | 0.34 |
Sylvain Arreckx | 5 | 0 | 0.34 |
Alberto Noronha | 6 | 0 | 0.34 |
Marvin van Aalst | 7 | 0 | 0.68 |
Venkata P Satagopam | 8 | 0 | 0.34 |
Oliver Ebenhöh | 9 | 0 | 0.34 |
Reinhard Schneider | 10 | 0 | 0.34 |
Christophe Trefois | 11 | 0 | 0.34 |
Wei Gu | 12 | 9 | 2.38 |