Title
Mining Quasi Frequent Coexpression Subnetworks
Abstract
Mining multiple gene coexpressions networks allows for identifying context-specific modules, and improving biological function prediction. Frequent subnetworks represent essential biological modules. Existing algorithms for frequent subgraph mining do not scale for large networks. In this work, we propose a greedy approach for mining approximate frequent subgraphs. Experiments on two real coexpression networks demonstrate the effectiveness of the proposed algorithm. Biological enrichment analysis of the reported patterns show that the patterns are biologically relevant and enriched with known biological processes and KEGG pathways.
Year
DOI
Venue
2017
10.1109/BIBM.2017.8217922
2017 IEEE INTERNATIONAL CONFERENCE ON BIOINFORMATICS AND BIOMEDICINE (BIBM)
Keywords
DocType
ISSN
coexpression, graphs, frequent, subgraphs
Conference
2156-1125
Citations 
PageRank 
References 
0
0.34
0
Authors
2
Name
Order
Citations
PageRank
Eihab El Radie101.01
Saeed Salem218217.39